PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN18804.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 280aa    MW: 31081.4 Da    PI: 8.0752
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN18804.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.5e-1292137454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +h e+Er+RR+++N++f  Lr ++P+       K++Ka+ L  A+ YI++L
  KHN18804.1  92 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAILYINEL 137
                 799***********************6.....5***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.84488137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.53E-1291141No hitNo description
SuperFamilySSF474592.49E-1891157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-1092137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-1892158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.4E-1594143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MTEYRMNLWT DDNSSVMEAF MSSSDLSSLW LATPQSATST TTPGTAKAPP PCRCDSDHSD  60
LEASVAKQVV EPEKRPRKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK  120
MDKASLLGDA ILYINELKSK LNVLDSEKTE LEKQLDSTKK ELELATKNPP PPPPPPPPPG  180
PPPSNSVEPK KTTSKLADLE LEVKIIGWDA MVRIQCSKKN HPAARLMAAL KDLDLEVHHA  240
SVSVVNDLMI QQATVNMGNK FYTQEQLLSA LSSKVGDELR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17381KRPRKRGRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003531962.11e-143PREDICTED: transcription factor MYC2
SwissprotO496872e-99MYC4_ARATH; Transcription factor MYC4
TrEMBLA0A0B2QFC90.0A0A0B2QFC9_GLYSO; Transcription factor MYC4
STRINGGLYMA08G36720.21e-142(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF29383364
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17880.14e-87bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]